STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL9Oxysterol-binding protein; Belongs to the OSBP family. (685 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
   
 
 0.986
VAPB
VAMP associated protein B and C.
   
 
 0.985
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.791
OSBPL10
Oxysterol-binding protein; Belongs to the OSBP family.
   
   0.783
OSBPL11
Oxysterol-binding protein; Belongs to the OSBP family.
   
   0.783
ZNF710
Zinc finger protein 710.
   
 
 0.703
WDR44
WD repeat domain 44.
    
 
 0.692
IFRD1
Interferon related developmental regulator 1.
      
 0.666
SH3RF1
SH3 domain containing ring finger 1.
   
  
 0.631
WDR36
WD repeat domain 36.
      
 0.630
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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