Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
H2ZW06_LATCHRRM domain-containing protein. (1590 aa)    
Predicted Functional Partners:
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.932
BUD31
BUD31 homolog.
   
 0.931
XAB2
XPA binding protein 2.
   
 0.926
LOC102356421
ISY1 splicing factor homolog.
   
 0.924
SNW1
SNW domain containing 1.
   
 0.911
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.888
PPIE
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
 0.881
DHX38
DEAH-box helicase 38.
   
 0.869
NRF1
Nuclear respiratory factor 1.
    
 0.852
CWC15
CWC15 spliceosome associated protein homolog.
   
 
 0.841
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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