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PPRC1 protein (Latimeria chalumnae) - STRING interaction network
"PPRC1" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPRC1Uncharacterized protein; Peroxisome proliferator-activated receptor gamma, coactivator-related 1 (1590 aa)    
Predicted Functional Partners:
DKC1
Dyskeratosis congenita 1, dyskerin (506 aa)
     
   
  0.855
UBXN11
UBX domain protein 11 (533 aa)
           
  0.804
DYNC2LI1
Dynein, cytoplasmic 2, light intermediate chain 1 (362 aa)
           
  0.776
TRUB1
TruB pseudouridine (psi) synthase family member 1 (298 aa)
     
        0.723
NOL6
Nucleolar protein 6 (RNA-associated) (826 aa)
     
        0.694
PPM1B
Protein phosphatase, Mg2+/Mn2+ dependent, 1B (474 aa)
           
  0.671
NSUN6
NOP2/Sun RNA methyltransferase family member 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (469 aa)
     
        0.647
ATP6V0C
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (153 aa)
           
  0.636
GABPA
GA binding protein transcription factor, alpha subunit 60kDa (471 aa)
     
 
  0.632
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
   
  0.629
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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