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PPRC1 protein (Latimeria chalumnae) - STRING interaction network
"PPRC1" - Peroxisome proliferator-activated receptor gamma, coactivator-related 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPRC1Peroxisome proliferator-activated receptor gamma, coactivator-related 1 (1590 aa)    
Predicted Functional Partners:
NRF1
Nuclear respiratory factor 1 (339 aa)
     
  0.616
TFAM
Transcription factor A, mitochondrial (277 aa)
         
  0.588
GABPA
GA binding protein transcription factor, alpha subunit 60kDa (471 aa)
     
 
  0.576
TFB2M
Transcription factor B2, mitochondrial (375 aa)
     
 
  0.571
PPARGC1A
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha (783 aa)
         
0.546
NCBP2
Nuclear cap binding protein subunit 2, 20kDa (164 aa)
       
      0.509
TFB1M
Transcription factor B1, mitochondrial (352 aa)
     
 
  0.505
TRUB1
TruB pseudouridine (psi) synthase homolog 1 (E. coli) (298 aa)
     
        0.470
DKC1
Dyskeratosis congenita 1, dyskerin (506 aa)
     
        0.470
HMG20B
High mobility group 20B (353 aa)
         
  0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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