Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102356325Eph LBD domain-containing protein. (260 aa)    
Predicted Functional Partners:
H2ZUW3_LATCH
Uncharacterized protein.
 
 
  0.914
EPHA3
Uncharacterized protein.
 
 
  0.912
EPHB1
EPH receptor B1.
 
      0.881
H2ZU13_LATCH
SAM domain-containing protein.
 
      0.858
EFNB1
Ephrin B1; Belongs to the ephrin family.
   
 0.803
EFNB2
Ephrin B2; Belongs to the ephrin family.
   
 0.783
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
 0.750
NTRK3
Tyrosine-protein kinase receptor.
 
  
   0.673
EFNA2
Ephrin A2; Belongs to the ephrin family.
   
 0.651
EFNA1
Ephrin A1; Belongs to the ephrin family.
   
 0.619
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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