STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA1328Uncharacterized protein. (601 aa)    
Predicted Functional Partners:
MIPOL1
Mirror-image polydactyly 1.
   
    0.965
RPAP2
RNA polymerase II associated protein 2.
   
    0.965
CCDC14
Coiled-coil domain containing 14.
    
   0.931
FRK
Tyrosine-protein kinase.
   
    0.813
ZGPAT
Zinc finger, CCCH-type with G patch domain.
    
   0.712
MRPS16
Mitochondrial ribosomal protein S16.
      
 0.596
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
   
  
 0.583
STAP2
Uncharacterized protein.
      
 0.581
WDPCP
WD repeat containing planar cell polarity effector.
   
    0.570
MAT2B
Methionine adenosyltransferase 2 subunit beta; Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine.
      
 0.536
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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