Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC69Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
ASPN
Asporin.
  
     0.432
H3AWB3_LATCH
Uncharacterized protein.
  
     0.422
VANGL1
Vang-like protein.
   
 0.414
VANGL2
Vang-like protein.
   
 0.414
LOC102349972
Uncharacterized protein.
    
 0.409
DLG2
Guanylate kinase-like domain-containing protein.
    
 0.409
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
    
 0.409
DLG1
Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.
    
 0.409
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
    
 0.409
LRRTM3
Leucine rich repeat transmembrane neuronal 3.
  
   0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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