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TDRD3 protein (Latimeria chalumnae) - STRING interaction network
"TDRD3" - Tudor domain containing 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD3Tudor domain containing 3 (746 aa)    
Predicted Functional Partners:
TOP3B
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (863 aa)
     
 
  0.965
FANCM
Fanconi anemia, complementation group M (2075 aa)
     
 
  0.956
TOP3A
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (999 aa)
     
 
  0.912
RMI2
RecQ mediated genome instability 2 (158 aa)
     
 
  0.870
WRN
Werner syndrome, RecQ helicase-like (1469 aa)
     
 
  0.850
TDRD1
Tudor domain containing 1 (1170 aa)
     
 
  0.794
SMNDC1
Survival motor neuron domain containing 1 (238 aa)
     
   
  0.781
TDRD7
Tudor domain containing 7 (1111 aa)
     
 
  0.780
MUS81
Uncharacterized protein; MUS81 structure-specific endonuclease subunit (421 aa)
     
 
  0.777
FXR1
Fragile X mental retardation, autosomal homolog 1 (679 aa)
     
 
  0.777
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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