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TDRD3 protein (Latimeria chalumnae) - STRING interaction network
"TDRD3" - Tudor domain containing 3 in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD3Tudor domain containing 3 (746 aa)    
Predicted Functional Partners:
POLR2A
Polymerase (RNA) II (DNA directed) polypeptide A, 220kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1920 aa)
       
      0.930
TOP3B
Topoisomerase (DNA) III beta; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (863 aa)
     
  0.929
TOP3A
Topoisomerase (DNA) III alpha; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (999 aa)
     
  0.925
POLR3A
Polymerase (RNA) III (DNA directed) polypeptide A, 155kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1355 aa)
       
      0.828
WRN
Werner syndrome, RecQ helicase-like (1469 aa)
     
  0.811
UBXN7
UBX domain protein 7 (505 aa)
     
      0.799
FANCM
Fanconi anemia, complementation group M (2075 aa)
     
  0.747
RECQL
RecQ protein-like (DNA helicase Q1-like) (644 aa)
     
  0.742
BLM
Bloom syndrome, RecQ helicase-like (1450 aa)
     
  0.742
RECQL4
Uncharacterized protein (1456 aa)
     
  0.742
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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