Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JMJD7Jumonji domain containing 7. (315 aa)    
Predicted Functional Partners:
DRG1
Developmentally regulated GTP binding protein 1.
     
 0.832
DRG2
Developmentally regulated GTP binding protein 2.
   
 0.782
ZC3H15
Zinc finger CCCH-type containing 15.
   
 
 0.768
RWDD1
RWD domain containing 1.
     
 0.743
PLA2G4A
Phospholipase A2.
     
  0.554
LOC102351206
Phospholipase A2.
 
    
 0.538
PLA2G4F
Phospholipase A2.
 
      0.473
PLA2G6
Phospholipase A2 group VI.
     
 0.423
IGF2
Insulin like growth factor 2.
     
  0.409
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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