STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D19TBC1 domain family member 19. (528 aa)    
Predicted Functional Partners:
TTLL1
Tubulin tyrosine ligase like 1.
   
 
 0.679
TBC1D10C
Rab-GAP TBC domain-containing protein.
      
 0.607
NICN1
Nicolin 1.
    
   0.568
TBC1D13
TBC1 domain family member 13.
      
 0.564
TBC1D7
TBC1 domain family member 7.
      
 0.551
LRRC49
Leucine rich repeat containing 49.
   
   0.549
TTL
Tubulin tyrosine ligase.
   
 
 0.478
WDFY3
Uncharacterized protein.
      
 0.477
TBC1D17
TBC1 domain family member 17.
      
 0.471
EVI5
Ecotropic viral integration site 5.
      
 0.468
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.