Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D19TBC1 domain family member 19. (528 aa)    
Predicted Functional Partners:
TTLL1
Tubulin tyrosine ligase like 1.
   
 
 0.964
NICN1
Nicolin 1.
    
   0.963
LRRC49
Leucine rich repeat containing 49.
   
   0.960
C11orf49
Chromosome 11 open reading frame 49.
   
   0.834
TBC1D13
TBC1 domain family member 13.
      
 0.795
TBC1D22B
TBC1 domain family member 22B.
      
 0.777
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
   0.766
TBC1D10C
Rab-GAP TBC domain-containing protein.
      
 0.766
TBC1D16
TBC1 domain family member 16.
      
 0.691
TBC1D7
TBC1 domain family member 7.
      
 0.670
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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