STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM17Transmembrane protein 17. (196 aa)    
Predicted Functional Partners:
TMEM231
Transmembrane protein 231.
    
 
 0.704
B9D1
B9 domain containing 1.
    
 
 0.704
TMEM237
Transmembrane protein 237.
   
  
 0.700
NPHP1
SH3 domain-containing protein.
      
 0.694
TMEM67
Transmembrane protein 67.
      
 0.691
TTLL10
Tubulin tyrosine ligase like 10.
      
 0.627
NPHP4
Nephrocystin 4.
      
 0.616
B9D2
B9 domain containing 2.
    
 
 0.603
DRC7
Dynein regulatory complex subunit 7.
      
 0.595
RPGRIP1L
RPGRIP1 like.
      
 0.595
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.