Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM17Transmembrane protein 17. (196 aa)    
Predicted Functional Partners:
TMEM231
Transmembrane protein 231.
    
 
 0.902
TTLL10
Tubulin tyrosine ligase like 10.
      
 0.853
TCTN1
Tectonic family member 1.
      
 0.846
DRC7
Dynein regulatory complex subunit 7.
      
 0.841
TTC25
Tetratricopeptide repeat domain 25.
      
 0.792
DNALI1
Dynein axonemal light intermediate chain 1.
      
 0.717
IFT52
Intraflagellar transport 52.
      
 0.713
TMEM218
Transmembrane protein 218.
   
  
 0.691
RPGRIP1L
RPGRIP1 like.
      
 0.690
TTLL9
Tubulin tyrosine ligase like 9.
      
 0.683
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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