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STRINGSTRING
SYAP1 protein (Latimeria chalumnae) - STRING interaction network
"SYAP1" - Synapse associated protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYAP1Synapse associated protein 1 (352 aa)    
Predicted Functional Partners:
EML2
Echinoderm microtubule associated protein like 2 (637 aa)
           
  0.646
PSMA5
Proteasome (prosome, macropain) subunit, alpha type,5 (244 aa)
       
      0.614
PSMB4
Proteasome (prosome, macropain) subunit, beta type, 4 (274 aa)
       
      0.607
NDUFS7
NADH-ubiquinone oxidoreductase core subunit S7; NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase); Belongs to the complex I 20 kDa subunit family (179 aa)
           
  0.548
ACOT9
acyl-CoA thioesterase 9 (442 aa)
     
   
  0.528
AEBP2
AE binding protein 2 (456 aa)
     
   
  0.481
PGM2L1
Phosphoglucomutase 2-like 1; Belongs to the phosphohexose mutase family (528 aa)
           
  0.461
PGM2
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family (537 aa)
           
  0.461
USP9X
Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family (2505 aa)
     
   
  0.451
SETD1A
SET domain containing 1A (1677 aa)
           
  0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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