Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H2ZW26_LATCHUncharacterized protein. (352 aa)    
Predicted Functional Partners:
HECA
Hdc homolog, cell cycle regulator.
      
 0.587
NOC4L
Nucleolar complex associated 4 homolog.
      
 0.585
MAP7D3
MAP7 domain containing 3.
    
   0.573
GNB1L
G protein subunit beta 1 like.
      
 0.515
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.499
VIPAS39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog.
   
  
 0.485
EIF2S3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
  
 0.466
PIN4
Peptidyl-prolyl cis-trans isomerase.
    
   0.449
H3B144_LATCH
Uncharacterized protein.
      
 0.443
ETF1
Eukaryotic translation termination factor 1.
   
   0.441
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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