STRINGSTRING
SP5 protein (Latimeria chalumnae) - STRING interaction network
"SP5" - annotation not available in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP5annotation not available (372 aa)    
Predicted Functional Partners:
LINGO2
Leucine rich repeat and Ig domain containing 2 (619 aa)
       
 
  0.782
CHAC2
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides (203 aa)
           
  0.781
UBR3
Ubiquitin protein ligase E3 component n-recognin 3 (putative) (1851 aa)
           
  0.778
ASB3
Ankyrin repeat and SOCS box-containing 3 (525 aa)
     
 
  0.690
MMP28
Matrix metallopeptidase 28 (486 aa)
       
 
  0.672
OTX2
Uncharacterized protein; Orthodenticle homolog 2 (308 aa)
     
 
  0.671
EMX2
Empty spiracles homeobox 2 (247 aa)
       
 
  0.667
EMX1
Empty spiracles homeobox 1 (233 aa)
       
 
  0.578
MYO3B
Uncharacterized protein; Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (805 aa)
     
 
  0.533
ENSLACG00000014766
Phosphodiesterase (504 aa)
     
 
  0.506
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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