STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102349839Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (492 aa)    
Predicted Functional Partners:
H3AGW9_LATCH
Uncharacterized protein.
 
      0.899
BAP1
BRCA1 associated protein 1.
    
 0.748
H2ZYC9_LATCH
Uncharacterized protein.
 
    
 0.717
H2ZX73_LATCH
CAP-Gly domain-containing protein.
 
      0.680
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
    
 0.526
ARID4A
AT-rich interaction domain 4A.
    
 0.471
WDR90
WD repeat domain 90.
   
  0.454
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.421
HCFC2
Host cell factor C2.
    
 0.414
HCFC1
Host cell factor C1.
    
 0.414
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.