STRINGSTRING
CHID1 protein (Latimeria chalumnae) - STRING interaction network
"CHID1" - Chitinase domain containing 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHID1Chitinase domain containing 1 (392 aa)    
Predicted Functional Partners:
LYPLA2
Lysophospholipase II (232 aa)
           
  0.832
NEK7
NIMA-related kinase 7 (302 aa)
           
  0.748
OVGP1
Oviductal glycoprotein 1, 120kDa (378 aa)
           
  0.743
PTGS2
Prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) (620 aa)
           
  0.660
LYPLA1
Lysophospholipase I (230 aa)
           
  0.527
DDR2
Discoidin domain receptor tyrosine kinase 2 (838 aa)
           
  0.491
ENSLACG00000007600
Uncharacterized protein (782 aa)
           
  0.491
DDR1
Discoidin domain receptor tyrosine kinase 1 (964 aa)
           
  0.491
SNRNP27
Small nuclear ribonucleoprotein 27kDa (U4/U6.U5) (133 aa)
           
  0.457
CHIA
Uncharacterized protein (461 aa)
           
  0.426
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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