STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHID1Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family. (392 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.816
PSAP
Prosaposin; Prosaposin: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling.
     
 0.728
RAB29
RAB29, member RAS oncogene family.
      
 0.706
SLC35B4
Solute carrier family 35 member B4.
      
 0.677
ENKUR
Enkurin, TRPC channel interacting protein.
    
 
 0.586
EFHC2
EF-hand domain containing 2.
    
 
 0.582
EFHC1
EF-hand domain containing 1.
    
 
 0.582
H3AK36_LATCH
Uncharacterized protein.
    
 
 0.571
RAD21
RAD21 cohesin complex component.
    
 
 0.571
H3B7Q4_LATCH
Uncharacterized protein.
    
 
 0.571
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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