STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHID1Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family. (392 aa)    
Predicted Functional Partners:
PSAP
Prosaposin; Prosaposin: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling.
     
 0.754
RAB29
RAB29, member RAS oncogene family.
      
 0.734
LOC102354290
Uncharacterized protein.
    
   0.684
SFTPB
Uncharacterized protein.
     
  0.676
WDR90
WD repeat domain 90.
    
 
 0.668
TIMM21
Translocase of inner mitochondrial membrane 21.
      
 0.647
SLC35B4
Solute carrier family 35 member B4.
      
 0.641
CTBS
Chitobiase; Belongs to the glycosyl hydrolase 18 family.
      
 0.641
CNDP2
Carnosine dipeptidase 2.
      
 0.639
PGM3
Phosphoglucomutase 3.
      
 0.634
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.