• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PCBP2 protein (Latimeria chalumnae) - STRING interaction network
"PCBP2" - poly(rC) binding protein 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBP2poly(rC) binding protein 2 (433 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like (803 aa)
     
 
  0.892
ELAVL1
ELAV like RNA binding protein 1; Belongs to the RRM elav family (355 aa)
     
 
  0.880
EIF4B
Eukaryotic translation initiation factor 4B (651 aa)
     
 
  0.819
SRSF3
Serine/arginine-rich splicing factor 3 (171 aa)
     
 
  0.789
CCDC58
Coiled-coil domain containing 58 (148 aa)
     
      0.787
GNB2L1
Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 (317 aa)
     
 
  0.773
FUBP3
Far upstream element (FUSE) binding protein 3 (579 aa)
     
 
0.723
XRN2
5’-3’ exoribonuclease 2 (921 aa)
     
 
  0.706
PTBP1
Polypyrimidine tract binding protein 1 (560 aa)
     
 
  0.705
EIF4G1
Eukaryotic translation initiation factor 4 gamma, 1 (1640 aa)
     
 
  0.703
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
Server load: low (12%) [HD]