STRINGSTRING
PCBP2 protein (Latimeria chalumnae) - STRING interaction network
"PCBP2" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBP2Uncharacterized protein (433 aa)    
Predicted Functional Partners:
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
     
  0.797
SRSF3
Serine/arginine-rich splicing factor 3 (171 aa)
     
  0.756
SRSF6
Serine/arginine-rich splicing factor 6 (338 aa)
     
  0.751
HNRNPD
Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) (309 aa)
     
  0.734
HNRPDL
Heterogeneous nuclear ribonucleoprotein D-like (172 aa)
     
  0.734
HNRNPC
Heterogeneous nuclear ribonucleoprotein C (C1/C2) (303 aa)
     
  0.731
ELAVL1
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) (355 aa)
     
  0.716
PTBP2
Polypyrimidine tract binding protein 2 (535 aa)
       
  0.691
SRSF1
Serine/arginine-rich splicing factor 1 (266 aa)
     
  0.689
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1 (374 aa)
     
  0.667
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (6%) [HD]