STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TACR3Tachykinin receptor 3; Belongs to the G-protein coupled receptor 1 family. (326 aa)    
Predicted Functional Partners:
LOC102359416
Uncharacterized protein.
    
 0.817
SDHAF3
Succinate dehydrogenase complex assembly factor 3.
    
 0.795
PROK2
Prokineticin 2.
     
 0.639
HS6ST1
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.544
OS9
OS9 endoplasmic reticulum lectin.
      
 0.507
CHD7
Chromodomain helicase DNA binding protein 7.
      
 0.499
GNA11
G protein subunit alpha 11.
    
 0.499
GNB4
G protein subunit beta 4.
    
 0.486
GNB1
G protein subunit beta 1.
    
 0.486
GNB3
G protein subunit beta 3.
    
 0.479
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.