STRINGSTRING
PHF11 protein (Latimeria chalumnae) - STRING interaction network
"PHF11" - PHD finger protein 11 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF11PHD finger protein 11 (304 aa)    
Predicted Functional Partners:
ASH2L
Ash2 (absent, small, or homeotic)-like (Drosophila) (448 aa)
     
  0.778
RBBP5
Retinoblastoma binding protein 5 (494 aa)
     
  0.744
BRPF1
Bromodomain and PHD finger containing, 1 (1215 aa)
     
  0.718
BRD1
Bromodomain containing 1 (1190 aa)
     
  0.718
BRPF3
Bromodomain and PHD finger containing, 3 (1194 aa)
     
  0.718
UBA52
Uncharacterized protein (128 aa)
     
  0.686
KDM6A
Lysine (K)-specific demethylase 6A (1452 aa)
     
  0.676
MYBL2
V-myb myeloblastosis viral oncogene homolog (avian)-like 2 (590 aa)
     
  0.673
MYBL1
V-myb myeloblastosis viral oncogene homolog (avian)-like 1 (749 aa)
     
  0.673
MYB
V-myb myeloblastosis viral oncogene homolog (avian) (761 aa)
     
  0.673
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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