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GTPBP4 protein (Latimeria chalumnae) - STRING interaction network
"GTPBP4" - Nucleolar GTP-binding protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (634 aa)    
Predicted Functional Partners:
GLTSCR2
NOP53 ribosome biogenesis factor; Glioma tumor suppressor candidate region gene 2 (399 aa)
     
 
  0.998
DDX55
RNA helicase; DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 (597 aa)
     
 
  0.998
DDX21
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (582 aa)
     
 
  0.996
NSA2
NSA2 ribosome biogenesis homolog (S. cerevisiae) (260 aa)
     
 
  0.995
RSL24D1
Ribosomal L24 domain containing 1 (165 aa)
     
 
  0.995
GNL2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation (731 aa)
     
 
  0.995
RPF2
Ribosome production factor 2 homolog (S. cerevisiae) (309 aa)
     
 
  0.993
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (584 aa)
     
 
  0.993
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (238 aa)
     
 
  0.992
NSUN6
NOP2/Sun RNA methyltransferase family member 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (469 aa)
     
 
  0.991
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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