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STRINGSTRING
PPAN protein (Latimeria chalumnae) - STRING interaction network
"PPAN" - Peter pan homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPANPeter pan homolog (Drosophila) (470 aa)    
Predicted Functional Partners:
DDX55
RNA helicase; DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 (597 aa)
     
 
  0.989
RPF1
Ribosome production factor 1 homolog (S. cerevisiae) (375 aa)
     
 
  0.985
WDR74
WD repeat domain 74 (385 aa)
     
 
  0.985
RRP15
Ribosomal RNA processing 15 homolog (S. cerevisiae) (291 aa)
     
 
  0.984
BRIX1
BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) (345 aa)
     
 
  0.978
SURF6
Surfeit 6 (344 aa)
     
 
  0.976
IMP4
IMP4, U3 small nucleolar ribonucleoprotein (291 aa)
     
 
  0.975
RBM28
RNA binding motif protein 28 (559 aa)
     
      0.974
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (584 aa)
     
 
  0.973
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (760 aa)
     
 
  0.969
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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