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STRINGSTRING
NUP37 protein (Latimeria chalumnae) - STRING interaction network
"NUP37" - Nucleoporin 37kDa in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP37Nucleoporin 37kDa (326 aa)    
Predicted Functional Partners:
NUP43
Nucleoporin 43kDa (374 aa)
     
  0.998
NUP107
Nucleoporin 107kDa (930 aa)
     
  0.994
NUP85
Nucleoporin 85kDa (656 aa)
     
  0.991
NUP133
Nucleoporin 133kDa; Belongs to the actin family (1421 aa)
     
  0.991
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; SEC13 homolog (S. cerevisiae); Belongs to the WD repeat SEC13 family (320 aa)
     
 
  0.986
NUP98
Nucleoporin 98kDa (1790 aa)
     
  0.976
NUP160
Nucleoporin 160kDa (1326 aa)
     
 
  0.952
RFC4
Replication factor C (activator 1) 4, 37kDa (360 aa)
     
        0.841
SEH1L
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family (468 aa)
     
 
  0.833
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs) (343 aa)
     
   
  0.832
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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