Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SYT15Uncharacterized protein. (424 aa)    
Predicted Functional Partners:
H3BGQ4_LATCH
C2 domain-containing protein.
      
 0.665
ALG14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.640
PREPL
Prolyl endopeptidase like.
      
 0.615
RAPSN
Receptor associated protein of the synapse.
   
  
 0.612
COLQ
Collagen like tail subunit of asymmetric acetylcholinesterase.
      
 0.602
GMPPB
GDP-mannose pyrophosphorylase B.
    
 
 0.593
DPAGT1
Dolichyl-phosphate N-acetylglucosaminephosphotransferase 1.
      
 0.591
ITSN2
Intersectin 2.
     
 0.529
CHRND
Cholinergic receptor nicotinic delta subunit.
      
 0.508
DOK7
Docking protein 7.
      
 0.470
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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