STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP12LDL receptor related protein 12. (534 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.656
RELN
Reelin.
    
 0.517
APLP1
Amyloid beta (A4) precursor-like protein 1.
    
 0.464
AGRN
Agrin.
    
 0.443
HSPG2
Heparan sulfate proteoglycan 2.
    
 0.438
H3BFA3_LATCH
NtA domain-containing protein.
    
 0.438
H3AJ45_LATCH
Uncharacterized protein.
    
 0.436
ITSN1
Intersectin 1 (SH3 domain protein).
    
 0.436
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.421
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 0.416
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.