STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP12LDL receptor related protein 12. (534 aa)    
Predicted Functional Partners:
APLP1
Amyloid beta (A4) precursor-like protein 1.
    
 0.679
FKRP
Fukutin related protein.
     
 0.587
CCNE1
Cyclin E1; Belongs to the cyclin family.
      
 0.586
ITSN2
Intersectin 2.
    
 0.571
SUSD1
Sushi domain containing 1.
    
 0.540
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
      
 0.468
ZFAND4
Zinc finger AN1-type containing 4.
     
 0.456
PUM3
Pumilio RNA binding family member 3.
      
 0.452
MANF
Mesencephalic astrocyte derived neurotrophic factor.
      
 0.452
SRD5A3
Steroid 5 alpha-reductase 3.
      
 0.447
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.