STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOGARAM1TOG array regulator of axonemal microtubules 1. (941 aa)    
Predicted Functional Partners:
TOGARAM1-2
TOG domain-containing protein.
 
     0.929
ARMC9
Armadillo repeat containing 9.
    
 
 0.764
RRP36
Ribosomal RNA processing 36.
      
 0.559
CCDC66
Coiled-coil domain containing 66.
   
 
 0.522
CEP104
Centrosomal protein 104.
    
 
 0.496
KLHDC8B
Kelch domain containing 8B.
      
 0.495
H3B0Z8_LATCH
Uncharacterized protein.
      
 0.469
PUDP
Pseudouridine 5'-phosphatase.
      
 0.467
H3AJK5_LATCH
Uncharacterized protein.
      
 0.454
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.442
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.