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STRINGSTRING
CTSC protein (Latimeria chalumnae) - STRING interaction network
"CTSC" - Cathepsin C in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSCCathepsin C; Belongs to the peptidase C1 family (461 aa)    
Predicted Functional Partners:
CHCHD7
Coiled-coil-helix-coiled-coil-helix domain containing 7 (86 aa)
           
  0.714
CST7
Cystatin F (leukocystatin); Belongs to the cystatin family (139 aa)
     
 
  0.694
PPP2R2D
Protein phosphatase 2, regulatory subunit B, delta (447 aa)
           
  0.648
ENSLACG00000022164
Zgc-110410; Belongs to the BI1 family (301 aa)
     
   
  0.643
BIRC2
Baculoviral IAP repeat-containing 2 (616 aa)
     
 
    0.606
ENSLACG00000011531
Baculoviral IAP repeat-containing 5B (168 aa)
     
 
    0.605
BIRC5
Baculoviral IAP repeat containing 5 (139 aa)
         
    0.600
GNB3
G protein subunit beta 3; Guanine nucleotide binding protein (G protein), beta polypeptide 3 (341 aa)
       
 
  0.566
NPEPPS
Aminopeptidase puromycin sensitive (879 aa)
     
   
  0.516
PPP2R2A
Protein phosphatase 2, regulatory subunit B, alpha b (451 aa)
           
  0.493
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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