STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZW79_LATCHUncharacterized protein. (2340 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.603
H3A0X0_LATCH
IgGFc_binding domain-containing protein.
 
      0.558
LOC102345465
Uncharacterized protein.
   
  0.522
B4GAT1
Beta-1,4-glucuronyltransferase 1.
      
 0.522
H3AN32_LATCH
Uncharacterized protein.
   
  0.522
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.500
PARK7
Parkinsonism associated deglycase.
      
 0.467
LOC102358653
Tetraspanin.
     
 0.454
H2ZUV5_LATCH
IgGFc_binding domain-containing protein.
 
      0.450
FUNDC2
FUN14 domain containing 2.
      
 0.433
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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