Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTLL11Tubulin tyrosine ligase like 11. (547 aa)    
Predicted Functional Partners:
FBXW2
F-box and WD repeat domain containing 2.
      
 0.811
H3BCN4_LATCH
Tubulin tyrosine ligase-like family, member 5.
      
 0.792
POC5
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.782
ARMC9
Armadillo repeat containing 9.
      
 0.713
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.674
PSMD5
Proteasome 26S subunit, non-ATPase 5.
      
 0.673
ZNF362
Zinc finger protein 362.
      
 0.667
LOC102348363
DAB2 interacting protein a.
      
 0.659
EMP3
Epithelial membrane protein 3.
      
 0.658
KCNT1
Potassium sodium-activated channel subfamily T member 1.
      
 0.653
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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