STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM184CTransmembrane protein 184C. (479 aa)    
Predicted Functional Partners:
FAM204A
Family with sequence similarity 204 member A.
      
 0.602
HSF2
Heat shock transcription factor 2.
   
  
 0.578
PRMT9
Protein arginine methyltransferase 9; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.570
ACBD6
Acyl-CoA binding domain containing 6.
      
 0.528
RAB11FIP2
RAB11 family interacting protein 2.
    
 
 0.479
EDNRA
Endothelin receptor type A; Belongs to the G-protein coupled receptor 1 family.
 
    
 0.469
PNISR
PNN interacting serine and arginine rich protein.
      
 0.465
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.449
GABARAPL1
GABA type A receptor associated protein like 1.
    
   0.444
GABARAPL2
GABA type A receptor associated protein like 2.
    
   0.444
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.