STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMX3H6 family homeobox 3. (284 aa)    
Predicted Functional Partners:
LOC102356421
ISY1 splicing factor homolog.
    
   0.593
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.593
H3B8N9_LATCH
Uncharacterized protein.
    
   0.516
HINFP
Histone H4 transcription factor.
    
   0.516
NXPH2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.492
DTNA
Dystrobrevin.
   
   0.464
H2ZWY5_LATCH
Uncharacterized protein.
   
   0.464
DTNB
Dystrobrevin, beta b.
   
   0.464
LOC102357940
Uncharacterized protein.
    
 
 0.455
TBX1
T-box transcription factor 1.
    
 
 0.455
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.