STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZW94_LATCHUncharacterized protein. (314 aa)    
Predicted Functional Partners:
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 
 0.621
EIF1AX
Eukaryotic translation initiation factor 1A X-linked b.
      
 0.608
EDRF1
Erythroid differentiation regulatory factor 1.
      
 0.515
TXLNB
Taxilin beta.
      
 0.502
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 
 0.487
IFT80
Intraflagellar transport 80.
      
 0.473
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.465
H3AEW4_LATCH
Ig-like domain-containing protein.
      
 0.461
PROX1
Prospero homeobox 1.
      
 0.420
H3BDW1_LATCH
Ion_trans domain-containing protein.
      
 0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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