Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZW94_LATCHUncharacterized protein. (314 aa)    
Predicted Functional Partners:
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
   
 0.969
EIF1AX
Eukaryotic translation initiation factor 1A X-linked b.
      
 0.825
TXLNB
Taxilin beta.
      
 0.681
H3AEW4_LATCH
Ig-like domain-containing protein.
      
 0.641
PROX1
Prospero homeobox 1.
      
 0.641
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.641
IFT80
Intraflagellar transport 80.
      
 0.627
IGSF11
Immunoglobulin superfamily member 11.
      
 0.615
H3BDW1_LATCH
Ion_trans domain-containing protein.
      
 0.609
TNS4
Tensin 4.
      
 0.593
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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