STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF31Uncharacterized protein. (1087 aa)    
Predicted Functional Partners:
RBCK1
IBR domain-containing protein.
   
 0.998
SHARPIN
Uncharacterized protein.
   
 0.998
BIRC2
Baculoviral IAP repeat containing 2.
    
 0.996
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 0.993
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 0.990
LOC102356355
TNFR-Cys domain-containing protein.
    
 0.988
UBE2L6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.985
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.976
TNFAIP3
TNF alpha induced protein 3.
   
 0.976
H3B7S8_LATCH
TNF receptor-associated factor.
   
 0.976
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.