STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF31Uncharacterized protein. (1087 aa)    
Predicted Functional Partners:
LOC102356355
TNFR-Cys domain-containing protein.
    
 0.990
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 0.984
RBCK1
IBR domain-containing protein.
   
 0.975
SHARPIN
Uncharacterized protein.
   
 0.975
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 0.958
RPS27A
Ribosomal protein S27a.
   
 0.941
LOC102365523
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 0.911
UBE2L6
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.891
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.890
TBK1
TANK binding kinase 1.
    
 0.890
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.