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TBC1D9 protein (Latimeria chalumnae) - STRING interaction network
"TBC1D9" - TBC1 domain family, member 9 (with GRAM domain) in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D9TBC1 domain family, member 9 (with GRAM domain) (1258 aa)    
Predicted Functional Partners:
C2CD3
C2 calcium-dependent domain containing 3 (829 aa)
     
   
  0.662
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
     
  0.611
WDR46
WD repeat domain 46 (614 aa)
     
      0.602
DNAJC6
DnaJ (Hsp40) homolog, subfamily C, member 6 (993 aa)
     
 
  0.600
PPME1
Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated (294 aa)
     
   
  0.592
DNAJB13
DnaJ (Hsp40) homolog, subfamily B, member 13 (319 aa)
     
   
  0.588
CLTC
Clathrin, heavy chain (Hc); Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1695 aa)
     
 
    0.584
CLTCL1
Clathrin, heavy chain-like 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1695 aa)
     
 
    0.584
ELMOD1
ELMO/CED-12 domain containing 1 (238 aa)
     
   
  0.576
ELMOD2
ELMO/CED-12 domain containing 2 (298 aa)
     
   
  0.576
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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