STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D9TBC1 domain family member 9. (1258 aa)    
Predicted Functional Partners:
GAK
J domain-containing protein.
   
 
  0.966
ELMOD2
ELMO domain containing 2.
      
 0.776
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
  0.674
UCP1
Uncoupling protein 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
 
  
 0.592
SNAPIN
SNAP associated protein.
     
 0.551
UCP2
Uncoupling protein 2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
 
  
 0.528
AP5M1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
     
 0.514
AP1B1
AP complex subunit beta.
   
 
  0.490
AP2B1
AP complex subunit beta.
   
 
  0.490
HIP1R
Huntingtin interacting protein 1 related.
   
 
  0.478
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.