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INO80C protein (Latimeria chalumnae) - STRING interaction network
"INO80C" - INO80 complex subunit C in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80CINO80 complex subunit C (175 aa)    
Predicted Functional Partners:
ACTR5
ARP5 actin-related protein 5 homolog (yeast) (594 aa)
     
  0.959
INO80
INO80 homolog (S. cerevisiae) (1542 aa)
       
  0.924
RUVBL1
RuvB-like 1 (E. coli); Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair (467 aa)
     
  0.734
ACTR8
ARP8 actin-related protein 8 homolog (yeast) (631 aa)
     
  0.717
ACTL6A
Actin-like 6A (429 aa)
     
    0.661
RUVBL2
RuvB-like 2 (E. coli); Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair (466 aa)
     
  0.568
UCHL5
Ubiquitin carboxyl-terminal hydrolase L5 (329 aa)
     
    0.558
MCRS1
Microspherule protein 1 (479 aa)
     
    0.550
NFRKB
Nuclear factor related to kappaB binding protein (1198 aa)
       
    0.547
ACTL6B
Actin-like 6B (406 aa)
     
    0.496
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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