STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE28Zinc finger FYVE-type containing 28. (878 aa)    
Predicted Functional Partners:
RBM46
RNA binding motif protein 46.
      
 0.692
LOC102349118
Uncharacterized protein.
      
 0.539
PPP1R7
Protein phosphatase 1 regulatory subunit 7.
   
  
 0.499
H3AM31_LATCH
3'-5' exonuclease domain-containing protein.
      
 0.443
EXD3
Uncharacterized protein.
      
 0.443
SH3RF3
SH3 domain containing ring finger 3.
      
 0.428
M3XL61_LATCH
Uncharacterized protein.
      
 0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.