Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE28Zinc finger FYVE-type containing 28. (878 aa)    
Predicted Functional Partners:
RBM46
RNA binding motif protein 46.
      
 0.924
RPTOR
Regulatory associated protein of MTOR complex 1.
    
   0.816
RNF103
Ring finger protein 103.
      
 0.641
MLST8
MTOR associated protein, LST8 homolog.
    
   0.641
H3AM31_LATCH
3'-5' exonuclease domain-containing protein.
      
 0.639
EXD3
Uncharacterized protein.
      
 0.639
LOC102349118
Uncharacterized protein.
      
 0.591
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.575
SLITRK1
SLIT and NTRK like family member 1.
   
  
 0.517
H3B8U3_LATCH
Serine/threonine-protein kinase TOR.
    
   0.513
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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