Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H2ZWC4_LATCHIntegrase catalytic domain-containing protein. (274 aa)    
Predicted Functional Partners:
H3AC64_LATCH
Uncharacterized protein.
 
     0.673
H3BC74_LATCH
Reverse transcriptase domain-containing protein.
 
     0.672
H3AQ61_LATCH
Reverse transcriptase domain-containing protein.
 
     0.667
H2ZYX7_LATCH
Uncharacterized protein.
 
     0.574
H3B9C2_LATCH
Uncharacterized protein.
 
     0.549
H2ZXM7_LATCH
Uncharacterized protein.
 
     0.502
H2ZYF8_LATCH
Uncharacterized protein.
 
     0.500
H3AIK2_LATCH
Uncharacterized protein.
  
     0.490
H2ZXJ5_LATCH
Uncharacterized protein.
 
     0.488
H2ZYP8_LATCH
Reverse transcriptase domain-containing protein.
  
     0.458
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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