Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC102353313Si:ch73-41e3.7. (357 aa)    
Predicted Functional Partners:
PLAC8L1
PLAC8 like 1.
      
 0.610
H2ZVK6_LATCH
Uncharacterized protein; Belongs to the argonaute family.
   
 
 0.603
AGO4
Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily.
   
 
 0.603
AGO1
Argonaute RISC component 1; Belongs to the argonaute family.
   
 
 0.603
SLF1
SMC5-SMC6 complex localization factor 1.
      
 0.586
CPPED1
Metallophos domain-containing protein.
      
 0.556
RSRC2
Arginine and serine rich coiled-coil 2.
      
 0.539
ZMYM4
Uncharacterized protein.
   
  
 0.473
RNPC3
RNA binding region (RNP1, RRM) containing 3.
      
 0.448
FBXO38
F-box protein 38.
    
 
 0.438
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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