Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZWE3_LATCHUncharacterized protein. (222 aa)    
Predicted Functional Partners:
LOC102359396
Uncharacterized protein.
 
 
   0.967
PTPRK
Protein tyrosine phosphatase receptor type K.
 
      0.899
LOC102353569
Uncharacterized protein.
 
      0.899
H2ZXI9_LATCH
MAM domain-containing protein.
 
      0.898
PTPRT
Uncharacterized protein.
 
      0.897
H3AWF9_LATCH
Uncharacterized protein.
 
  
 
 0.894
H3AMZ9_LATCH
Uncharacterized protein.
 
  
 
 0.888
LOC102362769
Protein tyrosine phosphatase receptor type Jb, tandem duplicate 2.
 
 
 
 0.841
PTPRE
Protein tyrosine phosphatase receptor type E.
 
  
 
 0.826
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
 
  
 
 0.817
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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