STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZWE3_LATCHUncharacterized protein. (222 aa)    
Predicted Functional Partners:
LOC102359396
Uncharacterized protein.
 
 
 
 0.911
PTPRK
Protein tyrosine phosphatase receptor type K.
 
      0.899
LOC102353569
Uncharacterized protein.
 
      0.899
H2ZXI9_LATCH
MAM domain-containing protein.
 
      0.898
PTPRT
Uncharacterized protein.
 
      0.897
H3AWF9_LATCH
Uncharacterized protein.
 
  
   0.877
H3AMZ9_LATCH
Uncharacterized protein.
 
  
   0.869
LOC102362769
Protein tyrosine phosphatase receptor type Jb, tandem duplicate 2.
 
  
 
 0.838
PTPRE
Protein tyrosine phosphatase receptor type E.
 
  
   0.812
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
 
  
   0.787
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.