Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102367224Coiled-coil domain containing 114. (570 aa)    
Predicted Functional Partners:
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.880
CCDC151
Coiled-coil domain containing 151.
  
 
 0.867
TTC25
Tetratricopeptide repeat domain 25.
   
 
 0.851
TTC29
Tetratricopeptide repeat domain 29.
   
 0.837
RSPH4A
Radial spoke head component 4A.
   
 
 0.811
CFAP52
Cilia and flagella associated protein 52; Belongs to the peptidase C19 family.
   
 
 0.804
H3B708_LATCH
Uncharacterized protein.
   
 
 0.784
DNALI1
Dynein axonemal light intermediate chain 1.
  
 
 0.780
TEKT1
Tektin 1.
   
 
 0.762
TEKT2
Tektin 2.
   
 
 0.758
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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