STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZWF4_LATCHRibosomal_L6e_N domain-containing protein. (254 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.993
RPL28
Ribosomal protein L28.
   
 0.993
H3B787_LATCH
Ribosomal_L14e domain-containing protein.
   
 0.993
RPL7
Ribosomal protein L7.
  
 0.992
RPL4
Ribosomal protein L4.
  
 0.992
RPL23A
Ribosomal protein L23a.
  
 0.992
RPL17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.992
RPL21
Ribosomal protein L21.
   
 0.992
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.992
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.