STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP10Peptidylprolyl isomerase. (450 aa)    
Predicted Functional Partners:
SERPINH1
Serpin family H member 1; Belongs to the serpin family.
   
 
 0.808
TMEM38B
Transmembrane protein 38B.
      
 0.761
CRTAP
Cartilage associated protein.
   
  
 0.713
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.699
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
   
 0.698
SERPINF1
Serpin family F member 1; Belongs to the serpin family.
   
 
 0.670
PRRX2
Paired related homeobox 2.
   
  
 0.664
ATOH8
Atonal bHLH transcription factor 8.
      
 0.631
COPZ2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 
 0.625
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.619
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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