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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRG1LRRCT domain-containing protein. (337 aa)    
Predicted Functional Partners:
ENG
Endoglin.
   
 
 0.751
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.639
PRG4
Uncharacterized protein.
   
 
 0.538
LRRC18
Leucine rich repeat containing 18.
  
     0.530
LRRC58
Leucine rich repeat containing 58.
  
     0.509
LOC102363280
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 
 0.504
LOC102345199
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 
 0.461
H3A3Z8_LATCH
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.460
H3ACZ3_LATCH
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.454
LCAT
Lecithin-cholesterol acyltransferase.
      
 0.454
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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