STRINGSTRING
PPAP2B protein (Latimeria chalumnae) - STRING interaction network
"PPAP2B" - Phosphatidic acid phosphatase type 2B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPAP2BPhosphatidic acid phosphatase type 2B (285 aa)    
Predicted Functional Partners:
CERS1
Ceramide synthase 1 (282 aa)
     
  0.958
CERS5
Ceramide synthase 5 (392 aa)
     
  0.946
AGPAT2
1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) (211 aa)
   
 
  0.942
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (165 aa)
   
 
  0.942
SPHK1
Sphingosine kinase 1 (508 aa)
     
  0.942
SPHK2
Sphingosine kinase 2 (479 aa)
     
  0.942
PLD1
Phospholipase D1, phosphatidylcholine-specific (1072 aa)
     
 
  0.940
ENSLACG00000022434
Uncharacterized protein (341 aa)
     
 
  0.939
MOGAT2
Monoacylglycerol O-acyltransferase 2 (266 aa)
     
 
  0.939
MOGAT3
Monoacylglycerol O-acyltransferase 3 (326 aa)
     
 
  0.939
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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