STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLPP3Phospholipid phosphatase 3. (285 aa)    
Predicted Functional Partners:
LPIN2
Lipin 2.
    
 0.958
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.922
LOC102347500
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.921
SGPL1
Sphingosine-1-phosphate lyase 1.
    
 0.921
CEPT1
Choline/ethanolamine phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.921
SPHK2
Sphingosine kinase 2.
    
 0.920
LOC102366268
LNS2 domain-containing protein.
    
 0.918
PLPP2
Phospholipid phosphatase 2.
  
 
 
0.915
CERS5
Ceramide synthase 5.
    
 0.912
CERS1
Ceramide synthase 1.
    
 0.912
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.