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GDPD5 protein (Latimeria chalumnae) - STRING interaction network
"GDPD5" - Glycerophosphodiester phosphodiesterase domain containing 5 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDPD5Glycerophosphodiester phosphodiesterase domain containing 5 (334 aa)    
Predicted Functional Partners:
PRDX4
Peroxiredoxin 4 (269 aa)
     
 
  0.630
CTSB
Cathepsin B (344 aa)
     
   
  0.567
GPD2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial) (727 aa)
   
 
  0.566
SRPX
Sushi-repeat containing protein, X-linked (410 aa)
           
  0.543
PRDX3
Peroxiredoxin 3 (254 aa)
     
 
  0.505
ACLY
ATP citrate lyase (978 aa)
   
   
  0.503
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (244 aa)
   
 
  0.503
ERP44
Endoplasmic reticulum protein 44 (415 aa)
     
   
  0.492
GK
Glycerol kinase (557 aa)
   
   
  0.487
GK5
Glycerol kinase 5 (putative) (533 aa)
   
   
  0.487
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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