Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GDPD5Glycerophosphodiester phosphodiesterase domain containing 5. (334 aa)    
Predicted Functional Partners:
TBRG1
Transforming growth factor beta regulator 1.
      
 0.777
TSKU
Tsukushi, small leucine rich proteoglycan.
      
 0.743
P2RY2
Purinergic receptor P2Y2; Belongs to the G-protein coupled receptor 1 family.
      
 0.710
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.698
ACER3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
  
 0.690
P2RY6
Pyrimidinergic receptor P2Y6; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.685
FCHSD2
Uncharacterized protein.
      
 0.678
USP25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
   
  
 0.670
HSPA13
Heat shock protein family A (Hsp70) member 13.
      
 0.615
RAB30
RAB30, member RAS oncogene family.
      
 0.597
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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