STRINGSTRING
ENSLACG00000001562 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001562" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001562Uncharacterized protein (260 aa)    
Predicted Functional Partners:
ENSLACG00000000670
Uncharacterized protein (206 aa)
     
0.837
RQCD1
RCD1 required for cell differentiation1 homolog (S. pombe) (299 aa)
           
  0.571
TULP1
Tubby like protein 1 (530 aa)
           
  0.566
CIT
Citron (rho-interacting, serine/threonine kinase 21) (2066 aa)
           
  0.560
ENSLACG00000002141
Uncharacterized protein (229 aa)
     
0.528
ENSLACG00000002858
Uncharacterized protein (254 aa)
     
0.527
ENSLACG00000000857
Uncharacterized protein (221 aa)
     
0.527
ABL1
C-abl oncogene 1, non-receptor tyrosine kinase (1156 aa)
       
  0.498
ABL2
V-abl Abelson murine leukemia viral oncogene homolog 2 (1175 aa)
       
  0.498
GRK1
G protein-coupled receptor kinase 1; Retina-specific kinase involved in the signal turnoff via phosphorylation of rhodopsin (RHO), the G protein- coupled receptor that initiates the phototransduction cascade. This rapid desensitization is essential for scotopic vision and permits rapid adaptation to changes in illumination (566 aa)
           
  0.457
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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