Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GABPB2GA binding protein transcription factor subunit beta 2. (396 aa)    
Predicted Functional Partners:
GABPA
GA binding protein transcription factor subunit alpha.
    
 0.971
TPD52L2
TPD52 like 2.
    
  0.767
TDRD7
Tudor domain containing 7.
    
 0.722
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.545
TFAM
Transcription factor A, mitochondrial.
     
 0.531
POLRMT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.504
H3AUU2_LATCH
ANK_REP_REGION domain-containing protein.
  
     0.492
NFKBIB
NFKB inhibitor beta.
  
     0.489
TFB1M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
     
 0.476
SPPL2A
Signal peptide peptidase like 2A.
      
 0.467
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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