STRINGSTRING
IFT88 protein (Latimeria chalumnae) - STRING interaction network
"IFT88" - Intraflagellar transport 88 homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT88Intraflagellar transport 88 homolog (Chlamydomonas) (833 aa)    
Predicted Functional Partners:
IFT57
Intraflagellar transport 57 homolog (Chlamydomonas) (428 aa)
     
  0.883
IFT80
Intraflagellar transport 80 (780 aa)
     
  0.874
IFT81
Intraflagellar transport 81 homolog (Chlamydomonas) (680 aa)
     
  0.870
IFT140
Intraflagellar transport 140 homolog (Chlamydomonas) (1471 aa)
     
 
  0.870
IFT46
Intraflagellar transport 46 homolog (Chlamydomonas) (354 aa)
     
  0.861
IFT52
Intraflagellar transport 52 homolog (Chlamydomonas) (440 aa)
     
  0.842
IFT122
Intraflagellar transport 122 homolog (Chlamydomonas) (1118 aa)
     
  0.839
IFT74
Intraflagellar transport 74 homolog (Chlamydomonas) (234 aa)
     
  0.833
KIF3A
Kinesin family member 3A (731 aa)
     
 
  0.825
IFT20
Intraflagellar transport 20 homolog (Chlamydomonas) (132 aa)
     
  0.817
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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