STRINGSTRING
SYT14 protein (Latimeria chalumnae) - STRING interaction network
"SYT14" - Synaptotagmin XIV in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT14Synaptotagmin XIV (436 aa)    
Predicted Functional Partners:
ZNF592
Zinc finger protein 592 (1315 aa)
           
  0.556
SETX
Senataxin (2165 aa)
           
  0.478
ATXN10
Ataxin 10 (228 aa)
           
  0.478
ADCK4
aarF domain containing kinase 4 (674 aa)
           
  0.469
ENSLACG00000018084
Uncharacterized protein (504 aa)
           
  0.469
ADCK3
aarF domain containing kinase 3 (407 aa)
           
  0.469
BEAN1
Brain expressed, associated with NEDD4, 1 (240 aa)
     
   
  0.449
YLPM1
YLP motif containing 1 (1900 aa)
           
  0.448
BPNT1
3’(2’), 5’-bisphosphate nucleotidase 1 (308 aa)
           
  0.447
KCNK5
Potassium channel, subfamily K, member 5 (393 aa)
           
  0.447
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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