Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT14Synaptotagmin 14. (436 aa)    
Predicted Functional Partners:
C3orf67
Chromosome 3 open reading frame 67.
      
 0.592
KCNJ4
Potassium voltage-gated channel subfamily J member 4.
      
 0.588
ITSN2
Intersectin 2.
     
 0.529
GOLT1B
Golgi transport 1B.
      
 0.502
H2ZWA4_LATCH
Uncharacterized protein.
    
 
 0.493
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.473
STX4
t-SNARE coiled-coil homology domain-containing protein.
    
 0.473
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.473
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
    
 0.473
STX2
Syntaxin 2; Belongs to the syntaxin family.
    
 0.473
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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