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VARS2 protein (Latimeria chalumnae) - STRING interaction network
"VARS2" - valyl-tRNA synthetase 2, mitochondrial in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VARS2valyl-tRNA synthetase 2, mitochondrial (1036 aa)    
Predicted Functional Partners:
CAD
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (2203 aa)
   
 
  0.906
FARS2
phenylalanyl-tRNA synthetase 2, mitochondrial (453 aa)
   
   
  0.871
LARS2
leucyl-tRNA synthetase 2, mitochondrial (911 aa)
     
 
  0.865
LARS
leucyl-tRNA synthetase (1178 aa)
     
 
  0.863
RPL11
Ribosomal protein L11 (184 aa)
     
 
  0.850
RPL23A
Ribosomal protein L23a (153 aa)
     
 
  0.849
EPRS
glutamyl-prolyl-tRNA synthetase (1965 aa)
     
 
  0.842
VARS
valyl-tRNA synthetase (1201 aa)
   
0.838
MARS
methionyl-tRNA synthetase (905 aa)
     
 
  0.827
RPL35
Ribosomal protein L35 (123 aa)
     
 
  0.821
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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