Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ATP8B1Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1255 aa)    
Predicted Functional Partners:
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
    
 0.743
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.706
LOC102359099
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.706
ZNF367
Zinc finger protein 367.
    
 0.658
TJP2
Tight junction protein 2a (zona occludens 2).
      
 0.640
DHDH
Dihydrodiol dehydrogenase.
      
 0.545
APPBP2
Amyloid beta precursor protein binding protein 2.
   
  
 0.534
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.533
SPAG17
Sperm associated antigen 17.
      
 0.526
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
   
  
 0.501
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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