STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM51Transmembrane protein 51. (257 aa)    
Predicted Functional Partners:
AZI2
5-azacytidine induced 2.
      
 0.596
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.591
CDC42EP3
CDC42 effector protein 3.
      
 0.581
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.554
CCDC183
Uncharacterized protein.
      
 0.553
H2ZXZ8_LATCH
Uncharacterized protein.
      
 0.507
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.502
SUB1
SUB1 regulator of transcription.
      
 0.497
AJAP1
Adherens junctions associated protein 1.
      
 0.483
SLC2A13
Solute carrier family 2 member 13; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.483
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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