STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTBP2Polypyrimidine tract binding protein 2. (535 aa)    
Predicted Functional Partners:
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.967
HNRNPC
RRM domain-containing protein.
   
 0.963
MATR3
Uncharacterized protein.
   
 
 0.927
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.906
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.851
RBM10
RNA binding motif protein 10.
   
 0.816
RBM5
RNA binding motif protein 5.
   
 0.816
PUF60
Poly(U) binding splicing factor 60.
   
 
 0.811
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.797
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.797
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.