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BMS1 protein (Latimeria chalumnae) - STRING interaction network
BMS1 ribosome biogenesis factor in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMS1BMS1 ribosome biogenesis factor (1255 aa)    
Predicted Functional Partners:
DDX55
RNA helicase; DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 (597 aa)
     
 
  0.999
NOP14
NOP14 nucleolar protein (872 aa)
     
 
  0.995
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing (671 aa)
     
 
  0.994
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA-binding adapter protein THUMBD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1025 aa)
     
 
  0.993
PNO1
Partner of NOB1 homolog (S. cerevisiae) (250 aa)
     
 
  0.993
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
 
  0.992
WDR46
WD repeat domain 46 (614 aa)
     
 
  0.992
HEATR1
HEAT repeat containing 1 (1577 aa)
     
 
  0.992
TBL3
Transducin (beta)-like 3 (803 aa)
     
 
  0.992
CIRH1A
UTP4, small subunit processome component; Cirrhosis, autosomal recessive 1A (cirhin) (697 aa)
     
 
  0.992
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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